Source code for cellmil.interfaces.EvaluationReporterConfig

from pydantic import BaseModel, Field
from enum import Enum
from pathlib import Path

[docs]class Metrics(str, Enum): """Enumeration of available metrics for metrics report.""" accuracy = "accuracy" precision = "precision" recall = "recall" f1 = "f1" auroc = "auroc" c_index = "c_index"
[docs] @classmethod def values(cls): return [member.value for member in cls]
def __str__(self): return self.value
[docs]class EvaluationReporterConfig(BaseModel): """Configuration for generating evaluation reports""" metrics: list[Metrics] = Field(..., description="List of metrics to generate evaluation reports for") team : str = Field(..., description="Team name where the project belongs in wandb") projects : list[str] = Field(..., description="Project/s name where data is allocated in wandb") output_dir: Path = Field(default=Path("./evaluation_reports"), description="Directory to save evaluation reports")
[docs] class Config: arbitrary_types_allowed = True